CONFIG LIB 1.5
Configuration Files Library (by TGG 2020)
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Parameters file for PanuklAuto program (computation of one sequence) More...
#include <panukl_auto.h>
Public Member Functions | |
void | Clean () |
cleans local variables | |
int | Read (const char *AutoFile) |
reads AUTO file | |
int | Write (const char *AutoFile) |
writes AUTO file | |
Public Attributes | |
bool | Ms2Flag |
Mesh program flag (1-run Mesh3 with Ms2File, 0-don't run Mesh) | |
bool | NghFlag |
Neigh program flag (1-run Neigh with NghFile, 0-don't run Neigh) | |
bool | ParFlag |
Panukl program flag (1-run Panukl with ParFile, 0-don't run Panukl) | |
bool | PrsFlag |
Press program flag (1-run Press with PrsFile, 0-don't run Press) | |
char | Ms2File [256] |
MS2 filename. | |
char | NghFile [256] |
NGH filename. | |
char | ParFile [256] |
PAR filename. | |
char | PrsFile [256] |
PRS filename. | |
char | AUTO_file [256] |
AUTO filename. | |
Additional Inherited Members | |
Static Public Member Functions inherited from IOFUN | |
static void | Win2Unix (char *s) |
conversion of directory separators - MS Windows to Unix | |
static void | Unix2Win (char *s) |
conversion of directory separators - Unix to MS Windows | |
static int | ReadComm (FILE *stream) |
Function to read of a comment till the end of line. It returns 0 or EOF if it is performed. | |
static void | ReadDummy (FILE *stream) |
Function to read a comment line. | |
static int | ReadPar (FILE *stream, const char *Format, void *Par) |
Function to read one variable. The type of variable depends on Format, compatible with stdio library. | |
static int | ReadPar (FILE *stream, const char *Format, void *Par1, void *Par2) |
Function to read two variables. The type of variables depends on Format, compatible with stdio library. | |
static int | ReadPar (FILE *stream, const char *Format, void *Par1, void *Par2, void *Par3) |
Function to read three variables. The type of variables depends on Format, compatible with stdio library. | |
static int | ReadPar (FILE *stream, const char *Format, void *Par1, void *Par2, void *Par3, void *Par4) |
Function to read four variables. The type of variables depends on Format, compatible with stdio library. | |
static int | ReadVect3 (FILE *stream, double *Par, double dScal=1.) |
Function to read double vector "Par" of "3" dimension from FILE "stream". The read values are scaled by multiplier "dScal". | |
static int | ReadVect3 (FILE *stream, float *Par, float fScal=1.) |
Function to read float vector "Par" of "3" dimension from FILE "stream". The read values are scaled by multiplier "fScal". | |
static int | ReadVect3 (FILE *stream, long *Par, long lScal=1) |
Function to read long vector "Par" of "3" dimension from FILE "stream". The read values are scaled by multiplier "lScal". | |
static int | ReadVect3 (FILE *stream, int *Par, int iScal=1) |
Function to read int vector "Par" of "3" dimension from FILE "stream". The read values are scaled by multiplier "iScal". | |
static int | ReadVect (FILE *stream, double *Par, int n, double dScal=1.) |
Function to read double vector "Par" of "n" dimension from FILE "stream". The read values are scaled by multiplier "dScal". | |
static int | ReadVect (FILE *stream, float *Par, int n, float fScal=1.) |
Function to read float vector "Par" of "n" dimension from FILE "stream". The read values are scaled by multiplier "fScal". | |
static int | ReadVect (FILE *stream, long *Par, int n, long lScal=1) |
Function to read long vector "Par" of "n" dimension from FILE "stream". The read values are scaled by multiplier "lScal". | |
static int | ReadVect (FILE *stream, int *Par, int n, int iScal=1) |
Function to read int vector "Par" of "n" dimension from FILE "stream". The read values are scaled by multiplier "iScal". | |
static int | ReadStr (FILE *stream, char *Par) |
Function to read the new line from FILE "stream" and to store it in table of char "Par". The starting and ending blanc charaters are clipped. | |
static void | ReadStrL (FILE *stream, char *Par, int *len) |
Function to read the string (Par) from FILE "stream". It reads from current pointer of FILE to the end of line or EOF. Number of read characters is returned in "len". | |
static void | ClipString (char *string) |
Clipping of the "string" up to the first blanc character or comment "#" character. | |
static void | ClipFileName (char *string) |
Clipping of the ending blanc characters of "string". | |
static bool | CompareStrings (char *str1, char *str2) |
Compares two strings (str1 and str2). Returns true if they match, false otherwise. | |
static int | file_exist (const char *name) |
Returns true (1) if file "name" does exist, 0 otherwise. | |
static const char * | filename_name (const char *name) |
Returns pointer to filename without path. | |
static const char * | filename_ext (const char *buf) |
Returns pointer to filename extension. | |
static char * | filename_setext (char *buf, int buflen, const char *ext) |
set/change filename extension | |
static int | filename_dir (char *name) |
returns the length of the path in (path)name | |
static const char * | filename_date (const char *name) |
Returns pointer to the string that contains the date of last file modification/creation. | |
static FILE * | fopen (const char *filename, const char *mode) |
Cross-platform function to fopen function that supports UTF-8 encoded name. | |
static int | stat (const char *f, struct stat *b) |
Cross-platform function to stat() a file using a UTF-8 encoded name or value. | |
static size_t | strlcpy (char *d, const char *s, size_t bufsize) |
The implementation of nonstandard strlcpy function. | |
static int | nLines (FILE *stream) |
Returns number of lines of text file from current pointer to EOF. | |
static int | nColumns (FILE *stream, char Par[][32]) |
Returns number of columns of text file (number of strings in the first line). Names of columns are stored in Par array. | |
static int | isstrblank (char *cc, int iLen) |
Checks if string (cc) is blank (1/0) | |
static void | ReadVect3 (FILE *stream, VECTOR_3D *Vec, double dScal=1.) |
Function to read VECTOR_3D Vec components from FILE "stream". The read values are scaled by multiplier "dScal". | |
static int | readln (FILE *ff, char *value_x) |
Pascal style "readln" function to read string. | |
static int | readln (FILE *ff, int *value_x) |
Pascal style "readln" function to read int. | |
static int | readln (FILE *ff, long *value_x) |
Pascal style "readln" function to read long. | |
static int | readln (FILE *ff, float *value_x) |
Pascal style "readln" function to read float. | |
static int | readln (FILE *ff, double *value_x) |
Pascal style "readln" function to read double. | |
static int | readln (FILE *ff, long double *value_x) |
Pascal style "readln" function to read long double. | |
static int | readln (FILE *ff) |
Pascal style "readln" function to read comment. | |
static int | readln (FILE *ff, VECTOR_3D *vec) |
Pascal style "readln" function to read VECTOR_3D components. | |
static int | read (FILE *ff, char *value_x) |
Pascal style "read" function to read string. | |
static int | read (FILE *ff, int *value_x) |
Pascal style "read" function to read int. | |
static int | read (FILE *ff, long *value_x) |
Pascal style "read" function to read long. | |
static int | read (FILE *ff, float *value_x) |
Pascal style "read" function to read float. | |
static int | read (FILE *ff, double *value_x) |
Pascal style "read" function to read double. | |
static int | read (FILE *ff, long double *value_x) |
Pascal style "read" function to read long double. | |
static int | read (FILE *ff, VECTOR_3D *vec) |
Pascal style "read" function to read VECTOR_3D components. | |
Parameters file for PanuklAuto program (computation of one sequence)
Definition at line 27 of file panukl_auto.h.
PANUKL_AUTO::PANUKL_AUTO | ( | void | ) |
Definition at line 22 of file panukl_auto.cpp.
PANUKL_AUTO::~PANUKL_AUTO | ( | void | ) |
Definition at line 24 of file panukl_auto.cpp.
void PANUKL_AUTO::Clean | ( | void | ) |
cleans local variables
Definition at line 26 of file panukl_auto.cpp.
int PANUKL_AUTO::Read | ( | const char * | AutoFile | ) |
reads AUTO file
Definition at line 41 of file panukl_auto.cpp.
int PANUKL_AUTO::Write | ( | const char * | AutoFile | ) |
writes AUTO file
Definition at line 72 of file panukl_auto.cpp.
char PANUKL_AUTO::AUTO_file[256] |
AUTO filename.
Definition at line 41 of file panukl_auto.h.
char PANUKL_AUTO::Ms2File[256] |
MS2 filename.
Definition at line 36 of file panukl_auto.h.
bool PANUKL_AUTO::Ms2Flag |
Mesh program flag (1-run Mesh3 with Ms2File, 0-don't run Mesh)
Definition at line 31 of file panukl_auto.h.
char PANUKL_AUTO::NghFile[256] |
NGH filename.
Definition at line 37 of file panukl_auto.h.
bool PANUKL_AUTO::NghFlag |
Neigh program flag (1-run Neigh with NghFile, 0-don't run Neigh)
Definition at line 32 of file panukl_auto.h.
char PANUKL_AUTO::ParFile[256] |
PAR filename.
Definition at line 38 of file panukl_auto.h.
bool PANUKL_AUTO::ParFlag |
Panukl program flag (1-run Panukl with ParFile, 0-don't run Panukl)
Definition at line 33 of file panukl_auto.h.
char PANUKL_AUTO::PrsFile[256] |
PRS filename.
Definition at line 39 of file panukl_auto.h.
bool PANUKL_AUTO::PrsFlag |
Press program flag (1-run Press with PrsFile, 0-don't run Press)
Definition at line 34 of file panukl_auto.h.